PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_73880g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family GeBP
Protein Properties Length: 358aa    MW: 40091.9 Da    PI: 4.9617
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_73880g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57346.31.1e-1417114397
         DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgk....epsfskehdqkifelskk 94 
                        w +eDe  ++qG + +  k+g +  +++ ++ e++ +s+  +++ksql eK+rr+K +++  ++k+++g+     ++ +++h+++ ++l k+
  MA_73880g0010  17 TTHTWMDEDERFIMQGYLVC-VKEGLEFPKNMPQLLEKITDSLVHEANKSQLYEKLRRMKVRYESIKNKMAQGNikedLFAYKSSHEKELYKLWKQ 111
                    5678**************99.78999999***********************************99999665541111457899************ PP

         DUF573  95 iWg 97 
                     Wg
  MA_73880g0010 112 AWG 114
                    **8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.9E-1520114IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MATPSAKDSP HKSLKKTTHT WMDEDERFIM QGYLVCVKEG LEFPKNMPQL LEKITDSLVH  60
EANKSQLYEK LRRMKVRYES IKNKMAQGNI KEDLFAYKSS HEKELYKLWK QAWGEQPEGD  120
EVEVEPAGDA MEVDITEAVG DDTRRAGEEQ ITAGDRGEGD AEEEEEAQSD AGTDTVKEPK  180
TPSTEKALVS NHISAKAPVS NHIPAKAPVS SPMPNDKPED RLVYETLVYE TLRKETRGMM  240
AEVTRDVKEM AETSEAELKA YLDSRLSSAN GTRGTGGGSG RRINSAVWSI NRESGLDGIY  300
SLRELPPLDE ARVQMLEGKW REVQILETEA SLKRYAILQE ECSAHLKSLK TSKGNARS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1191010.0BT119101.1 Picea glauca clone GQ04101_H16 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP9800912
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.28e-10DNA-binding storekeeper protein-related transcriptional regulator